BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB022D03SP1|AL427890
(789 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1787 1500 0.0
>3x_Contig1787
Length = 34189
Score = 1500 bits (751), Expect = 0.0
Identities = 776/789 (98%), Gaps = 1/789 (0%)
Strand = Plus / Plus
Query: 1 aaggcacgtttaatttcatccaatggagtctctttgcaatatttdatctcctactaccag 60
|||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||
Sbjct: 27988 aaggcacgtttaatttcatccaatgg-gtctctttgcaatattttttctcctactaccag 28046
Query: 61 gtaaaaatcctcgtattgtattaaccggcgtccgtctgcatcatacctatcgataagttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28047 gtaaaaatcctcgtattgtattaaccggcgtccgtctgcatcatacctatcgataagttc 28106
Query: 121 taatatgtctcctttactgagttcaaaacccaatgcccttagagcgactttgaattcatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28107 taatatgtctcctttactgagttcaaaacccaatgcccttagagcgactttgaattcatg 28166
Query: 181 atagtcgagawatccatcattgttcatatcaaagagtgagaacgcctcgtatatwtcttg 240
|||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 28167 atagtcgagatatccatcattgttcatatcaaagagtgagaacgcctcgtatatttcttg 28226
Query: 241 tttctgttcttctaawaattccttttgtaaagtggatttatccacggatttcgctactcg 300
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28227 tttctgttcttctaataattccttttgtaaagtggatttatccacggatttcgctactcg 28286
Query: 301 tccactgggccttctgttattcatgtttctatgatccgaattgggttagatttcttgccg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28287 tccactgggccttctgttattcatgtttctatgatccgaattgggttagatttcttgccg 28346
Query: 361 ttgtgagtcttggctgtaagtcaatcgaacctcttaaawwacctcttttgctgcacgcgt 420
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 28347 ttgtgagtcttggctgtaagtcaatcgaacctcttaatttacctcttttgctgcacgcgt 28406
Query: 421 aaacttcgtgaaactwctttaaaawawgtttaaagatttcatgtttatgattatattgac 480
||||||||||||||| |||||||| | ||||||||||||||||||||||||||| |||||
Sbjct: 28407 aaacttcgtgaaacttctttaaaatatgtttaaagatttcatgtttatgattattttgac 28466
Query: 481 aatattgagtttaaggaacataaacacatatcctgaaagaaatgaaggcaataactgatg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28467 aatattgagtttaaggaacataaacacatatcctgaaagaaatgaaggcaataactgatg 28526
Query: 541 aataccttacagtactgccagatcaactactctttagttctaaaatgaaacaatggatct 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28527 aataccttacagtactgccagatcaactactctttagttctaaaatgaaacaatggatct 28586
Query: 601 ggaattaggagatagggtagtgctacgcagcctggcaggaactgtacggtttataggcga 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28587 ggaattaggagatagggtagtgctacgcagcctggcaggaactgtacggtttataggcga 28646
Query: 661 gacgcagtttgcagcggggatttggatcggtgttgagttagatgaacccttagggaagaa 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28647 gacgcagtttgcagcggggatttggatcggtgttgagttagatgaacccttagggaagaa 28706
Query: 721 cgatggtagcgtcaagggagtcaggtactttgaactcagtgagggtagaaaaggtcggat 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28707 cgatggtagcgtcaagggagtcaggtactttgaactcagtgagggtagaaaaggtcggat 28766
Query: 781 gtatggtat 789
|||||||||
Sbjct: 28767 gtatggtat 28775
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.32
Gapped
Lambda K H
1.38 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4485
Number of Sequences: 1807
Number of extensions: 4485
Number of successful extensions: 94
Number of sequences better than 1.0e-20: 1
length of query: 789
length of database: 10,358,551
effective HSP length: 16
effective length of query: 773
effective length of database: 10,329,639
effective search space: 7984810947
effective search space used: 7984810947
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (30.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.4 bits)